Other packages > Find by keyword >

aroma.apd  

A Probe-Level Data File Format Used by 'aroma.affymetrix' [deprecated]
View on CRAN: Click here


Download and install aroma.apd package within the R console
Install from CRAN:
install.packages("aroma.apd")

Install from Github:
library("remotes")
install_github("cran/aroma.apd")

Install by package version:
library("remotes")
install_version("aroma.apd", "0.7.1")



Attach the package and use:
library("aroma.apd")
Maintained by
Henrik Bengtsson
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2009-06-14
Latest Update: 2025-04-06
Description:
DEPRECATED. Do not start building new projects based on this package. (The (in-house) APD file format was initially developed to store Affymetrix probe-level data, e.g. normalized CEL intensities. Chip types can be added to APD file and similar to methods in the affxparser package, this package provides methods to read APDs organized by units (probesets). In addition, the probe elements can be arranged optimally such that the elements are guaranteed to be read in order when, for instance, data is read unit by unit. This speeds up the read substantially. This package is supporting the Aroma framework and should not be used elsewhere.)
How to cite:
Henrik Bengtsson (2009). aroma.apd: A Probe-Level Data File Format Used by 'aroma.affymetrix' [deprecated]. R package version 0.7.1, https://cran.r-project.org/web/packages/aroma.apd. Accessed 06 Nov. 2026.
Previous versions and publish date:
(2026-07-09 07:18), 0.1.6 (2009-06-14 21:07), 0.1.7 (2009-10-19 08:53), 0.1.8 (2011-02-01 08:48), 0.2.0 (2011-07-24 07:15), 0.2.2 (2012-04-04 22:17), 0.2.3 (2012-07-03 08:54), 0.3.0 (2013-08-02 23:57), 0.4.0 (2013-09-23 16:10), 0.5.0 (2014-02-27 21:16), 0.6.0 (2015-02-25 00:49), 0.6.1 (2022-07-18 01:00), 0.7.0 (2023-06-23 13:40)
Other packages that cited aroma.apd R package
View aroma.apd citation profile
Other R packages that aroma.apd depends, imports, suggests or enhances
Complete documentation for aroma.apd
Downloads during the last 30 days

Today's Hot Picks in Authors and Packages

rgen  
Random Sampling Distribution C++ Routines for Armadillo
Provides popular sampling distributions C++ routines based in armadillo through a header file appro ...
Download / Learn more Package Citations See dependency  
syn  
Creates Synonyms From Target Words
Generates synonyms from a given word drawing from a synonym list from the 'moby' project < ...
Download / Learn more Package Citations See dependency  
SimDissolution  
Modeling and Assessing Similarity of Drug Dissolutions Profiles
Implementation of a model-based bootstrap approach for testing whether two formulations are similar. ...
Download / Learn more Package Citations See dependency  
manhattanly  
Interactive Q-Q and Manhattan Plots Using 'plotly.js'
Create interactive manhattan, Q-Q and volcano plots that are usable from the R console, in 'Dash' a ...
Download / Learn more Package Citations See dependency  
seAMLess  
A Single Cell Transcriptomics Based Deconvolution Pipeline for Leukemia
Given a bulk transcriptomic (RNA-seq) sample of an Myeloid Leukemia patient calculates immune compos ...
Download / Learn more Package Citations See dependency  
r2resize  
In-Text Resize for Images, Tables and Fancy Resize Containers in 'shiny', 'rmarkdown' and 'quarto' Documents
Automatic resizing toolbar for containers, images and tables. Various resizable or expandable contai ...
Download / Learn more Package Citations See dependency  

29,315

R Packages

247,686

Dependencies

77,531

Author Associations

29,316

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA