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chromseq  

Split Chromosome 'Fasta' File
View on CRAN: Click here


Download and install chromseq package within the R console
Install from CRAN:
install.packages("chromseq")

Install from Github:
library("remotes")
install_github("cran/chromseq")

Install by package version:
library("remotes")
install_version("chromseq", "0.1.3")



Attach the package and use:
library("chromseq")
Maintained by
Shaoqian Ma
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2020-05-11
Latest Update: 2020-05-11
Description:
Chromosome files in the 'Fasta' format usually contain large sequences like human genome. Sometimes users have to split these chromosomes into different files according to their chromosome number. The 'chromseq' can help to handle this. So the selected chromosome sequence can be used for downstream analysis like motif finding. Howard Y. Chang(2019) .
How to cite:
Shaoqian Ma (2020). chromseq: Split Chromosome 'Fasta' File. R package version 0.1.3, https://cran.r-project.org/web/packages/chromseq. Accessed 03 Oct. 2026.
Previous versions and publish date:
No previous versions
Other packages that cited chromseq R package
View chromseq citation profile
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Complete documentation for chromseq
Functions, R codes and Examples using the chromseq R package
Some associated functions: id . readToList . replaceText . sortList . splitChr . subFasID . tex . text . 
Some associated R codes: data.R . readToList.R . replaceText.R . sortList.R . splitChr.R . subFasID.R .  Full chromseq package functions and examples
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